Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811230.1_cds_XP_016496636.1_10836
CDS Infomation

[gene=LOC107815540] [db_xref=GeneID:107815540] [protein=phosphoinositide phospholipase C 2-like isoform X3] [protein_id=XP_016496636.1] [location=join(10811..11125,11212..11408,11802..11943,13062..13199,13779..13981,14136..14253,14400..14552,14834..15136)] [gbkey=CDS]
Sequence

ATGTCTACCAATGATAATAAGCAACATTTCAAGGTCTGCTTCTGCTGGTCACTAGGATTC
AAGTTAAGGGGAGGTGAAATACCAGAAGATATTAAGCAAGTCTTTGAATTTTACTCAGTA
AACGGGATTATGAGCATAGATAATCTAATTAATTTCTTAGAGAAAGAACAGAAGGAGGTG
AATGTTACAAAAGTGGCCCAAATTATATTCAATAGCCTCAAGCATCATCACAATATTGTC
CACAAAAGAGGATTGAATCTTGATGCTTTCTTTAAATATCTTATTGGTGATTATAACTTT
GCCCACCAGTCTAAGGTCCACCAAAATATGGATGCTCCGTTGGCTCATTATTTTATATAC
ACTGGACATAACTCTTACTTAACTGGAAACCAGCTGAGCAGTGATTGTAGTACTGAACCT
ATAAAGAAGGCACTAAAGAAAGGAGTTAGAGTGATTGAATTGGACCTTTGGTCTAATATT
ACCAAAGATGATATCGATGTTCGTCACGGAGGGACACTGACAACTCCTGTTAAACTAAGC
AAATGTCTGAAAGCCATAAAGGAGGTTGCTTTCTCAGATTCTGAATATCCTGTTATATTA
ACCTTTGAAGACCACCTTCATCCTTACCCACACCTTCAAAAAAAAGTCGCTCAGATGGTC
AAGAAAACATTTGGTTCCATGCTATTCATCCCAAAATCAGAAATGGACGAATTTCCTTCA
CCAAACTTTTTAAAGAATAAAATCTTAATTTCGACGAAACCACCACCAAAAAGTAGCCCT
GAATCAGACAAGGAGAGGGATGAAGACCAGGATGAGGAGTTCGAAGAAGTTCTCAAATAT
AGAGATTTGATAGCAATCCATGCCACGAAGCATAAAGGTGGCATGGAAAATTTTGGGAGG
CATGCAAGTTTTGATAAAGTTGGACGTCTTAGCATGAATGAACAAGCCCTTGAAAAAGCT
TTAGCTGTCACTGAACACGGCCATCAACTAATTCGATTTACTCAACGACATATATTAAGG
GTGTACCCAAAGGGTGCACGCATTAATTCATCAAACTATGATCCTCTAATTGCATGGATG
CGCGGAGCTCAGATGGTTGCATTTAACATGCAGGGTTATTGTAAGTACCTATGGATGATG
CAAGGATTTTTTCGAGCCAACGGAGGATGTGGTTATGTGAAAAAACCAGAATTTTTACTA
AGTGCTGATGGCGCATGTCATGAAGTTTTCAATTCCATGGCCTTGCCAGTGAAGACAATT
CTCAAGGTTGGAATTGCGGGAGTCCCTGCTGATACTAAGAAGATGTGCAAAACTAGGATA
GTTGACGATCAATGGTTACCAATATGGAATGAGGAATTCGAATTCCCAATTCGTGTTCCT
GAACTGGCTTTGCTTCGCATTGATGTTAAAGATTATGACCCCTCTGGAGAAGATGAATTT
GCAGGACAAACATGTTTGCCAGTTTCTGAGCTCAGGACTGGGATTCGATGCGTTCCATTG
TATAAGCACAGAGGAGACGTCTACAGATCCGTAAAACTTCTCATGCGTTTCGAGTTCATG
AGTCCTTAA

Peptide Sequence

PEP ID

XP_016496636.1
PEP Infomation

PREDICTED: phosphoinositide phospholipase C 2-like isoform X3 [Nicotiana tabacum]
Sequence

MSTNDNKQHFKVCFCWSLGFKLRGGEIPEDIKQVFEFYSVNGIMSIDNLINFLEKEQKEV
NVTKVAQIIFNSLKHHHNIVHKRGLNLDAFFKYLIGDYNFAHQSKVHQNMDAPLAHYFIY
TGHNSYLTGNQLSSDCSTEPIKKALKKGVRVIELDLWSNITKDDIDVRHGGTLTTPVKLS
KCLKAIKEVAFSDSEYPVILTFEDHLHPYPHLQKKVAQMVKKTFGSMLFIPKSEMDEFPS
PNFLKNKILISTKPPPKSSPESDKERDEDQDEEFEEVLKYRDLIAIHATKHKGGMENFGR
HASFDKVGRLSMNEQALEKALAVTEHGHQLIRFTQRHILRVYPKGARINSSNYDPLIAWM
RGAQMVAFNMQGYCKYLWMMQGFFRANGGCGYVKKPEFLLSADGACHEVFNSMALPVKTI
LKVGIAGVPADTKKMCKTRIVDDQWLPIWNEEFEFPIRVPELALLRIDVKDYDPSGEDEF
AGQTCLPVSELRTGIRCVPLYKHRGDVYRSVKLLMRFEFMSP

Transcript Sequence

Gene sequence data has not been registered.